Index

A

avg_type (fre.app.generate_time_averages.timeAverager.timeAverager attribute)

B

baremetal_checkout_write() (in module fre.make.create_checkout_script)

C

cdoTimeAverager (class in fre.app.generate_time_averages.cdoTimeAverager) change_directory() (in module fre.app.helpers) check() (in module fre.pp.nccheck_script) check_dataset_for_ocean_grid() (in module fre.cmor.cmor_helpers) check_path_existence() (in module fre.cmor.cmor_helpers) check_test_function() (in module fre.check.frecheckexample) checkout_create() (in module fre.make.create_checkout_script) checkout_template() (in module fre.pp.checkout_script) chunk_to_legacy() (in module fre.app.remap_pp_components.remap_pp_components) clean_yaml() (in module fre.yamltools.helpers) cleanup() (in module fre.app.regrid_xy.tests.generate_files) cleanup_test() (in module fre.app.regrid_xy.tests.test_regrid_xy) cmor_config_subtool() (in module fre.cmor.cmor_config) cmor_find_subtool() (in module fre.cmor.cmor_finder) cmor_run_subtool() (in module fre.cmor.cmor_mixer) cmor_yaml_subtool() (in module fre.cmor.cmor_yamler) cmorize_all_variables_in_dir() (in module fre.cmor.cmor_mixer) cmorize_target_var_files() (in module fre.cmor.cmor_mixer)

combine() (in module fre.app.generate_time_averages.combine) combine_compile() (fre.yamltools.abstract_classes.MergeCompileYamls method) combine_model() (fre.yamltools.abstract_classes.MergeCompileYamls method) (fre.yamltools.abstract_classes.MergePPANYamls method) combine_platforms() (fre.yamltools.abstract_classes.MergeCompileYamls method) combine_settings() (fre.yamltools.abstract_classes.MergePPANYamls method) combine_yamls() (fre.yamltools.abstract_classes.MergePPANYamls method) compile_create() (in module fre.make.create_compile_script) consolidate_yamls() (in module fre.yamltools.combine_yamls_script) container_checkout_write() (in module fre.make.create_checkout_script) conv_mip_to_bronx_freq() (in module fre.cmor.cmor_helpers) create_4xdaily_file() (in module fre.pp.tests.test_ppval_script) create_annual_per_variable_climatologies() (in module fre.app.generate_time_averages.tests.test_combine) create_annual_timeseries() (in module fre.app.generate_time_averages.tests.test_wrapper) create_dir() (in module fre.app.remap_pp_components.remap_pp_components) create_lev_bnds() (in module fre.cmor.cmor_helpers) create_monthly_per_variable_climatologies() (in module fre.app.generate_time_averages.tests.test_combine) create_monthly_timeseries() (in module fre.app.generate_time_averages.tests.test_wrapper) create_tmp_dir() (in module fre.cmor.cmor_helpers)

D

dockerfile_create() (in module fre.make.create_docker_script)

E

empty_dir() (in module fre.cmor.tests.test_cmor_finder_make_simple_varlist) exp_config_file() (in module fre.cmor.tests.test_cmor_mixer_calendar_integration)

experiment_check() (in module fre.yamltools.helpers) extract_variables_from_files() (in module fre.app.generate_time_averages.wrapper)

F

fake_nc_filenames() (in module fre.cmor.tests.test_cmor_mixer_calendar_integration) filter_brands() (in module fre.cmor.cmor_helpers) find_gold_ocean_statics_file() (in module fre.cmor.cmor_helpers) find_statics_file() (in module fre.cmor.cmor_helpers) form_bronx_directory_name() (in module fre.app.generate_time_averages.combine) fre module fre.analysis module fre.analysis.freanalysis module fre.analysis.subtools module fre.analysis.tests module fre.analysis.tests.test_subtools module fre.app module fre.app.freapp module fre.app.generate_time_averages module fre.app.generate_time_averages.cdoTimeAverager module fre.app.generate_time_averages.combine module fre.app.generate_time_averages.frenctoolsTimeAverager module fre.app.generate_time_averages.frepytoolsTimeAverager module fre.app.generate_time_averages.generate_time_averages module fre.app.generate_time_averages.tests module fre.app.generate_time_averages.tests.test_cdoTimeAverager module fre.app.generate_time_averages.tests.test_combine module fre.app.generate_time_averages.tests.test_generate_time_averages module fre.app.generate_time_averages.tests.test_wrapper module fre.app.generate_time_averages.timeAverager module fre.app.generate_time_averages.wrapper module fre.app.helpers module fre.app.mask_atmos_plevel module fre.app.mask_atmos_plevel.mask_atmos_plevel module fre.app.mask_atmos_plevel.tests module fre.app.mask_atmos_plevel.tests.test_mask_atmos_plevel module fre.app.regrid_xy module fre.app.regrid_xy.regrid_xy module fre.app.regrid_xy.tests module fre.app.regrid_xy.tests.generate_files module fre.app.regrid_xy.tests.test_regrid_xy module fre.app.remap_pp_components module fre.app.remap_pp_components.remap_pp_components module fre.app.remap_pp_components.tests module fre.app.remap_pp_components.tests.test_remap_pp_components module fre.app.tests module fre.app.tests.test_helpers module fre.catalog module fre.catalog.frecatalog module fre.catalog.tests module fre.catalog.tests.test_fre_catalog module fre.check module fre.check.frecheck module fre.check.frecheckexample module fre.cmor module fre.cmor.cmor_config module fre.cmor.cmor_constants module fre.cmor.cmor_finder module fre.cmor.cmor_helpers module fre.cmor.cmor_mixer module fre.cmor.cmor_yamler module fre.cmor.frecmor module fre.cmor.tests module fre.cmor.tests.test_cmor_config_subtool module fre.cmor.tests.test_cmor_find_subtool module fre.cmor.tests.test_cmor_finder_make_simple_varlist module fre.cmor.tests.test_cmor_helpers module fre.cmor.tests.test_cmor_helpers_update_calendar module fre.cmor.tests.test_cmor_helpers_update_grid_label module fre.cmor.tests.test_cmor_mixer_calendar_integration module fre.cmor.tests.test_cmor_run_subtool module fre.cmor.tests.test_cmor_run_subtool_further_examples module fre.cmor.tests.test_cmor_yamler module fre.cmor.tests.test_cmor_yamler_freq_validation module fre.cmor.tests.test_cmor_yamler_subtool module fre.fre module fre.lazy_group module fre.list_ module fre.list_.frelist module fre.list_.list_experiments_script module fre.list_.list_platforms_script module

fre.list_.list_pp_components_script module fre.list_.tests module fre.list_.tests.test_list_experiments_script module fre.list_.tests.test_list_platforms_script module fre.list_.tests.test_list_pp_components_script module fre.make module fre.make.create_checkout_script module fre.make.create_compile_script module fre.make.create_docker_script module fre.make.create_makefile_script module fre.make.fremake module fre.make.make_helpers module fre.make.run_fremake_script module fre.make.tests module fre.make.tests.compilation module fre.make.tests.compilation.test_run_fremake_builds module fre.make.tests.test_create_checkout module fre.make.tests.test_create_compile module fre.make.tests.test_create_dockerfile module fre.make.tests.test_create_makefile module fre.make.tests.test_make_helpers module fre.make.tests.test_makefilefre_linkline module fre.make.tests.test_run_fremake module fre.pp module fre.pp.checkout_script module fre.pp.configure_script_yaml module fre.pp.frepp module fre.pp.histval_script module fre.pp.install_script module fre.pp.nccheck_script module fre.pp.ppval_script module fre.pp.run_script module fre.pp.split_netcdf_script module fre.pp.status_script module fre.pp.tests module fre.pp.tests.test_configure_script_yaml module fre.pp.tests.test_fre_pp_init module fre.pp.tests.test_histval_script module fre.pp.tests.test_nccheck_script module fre.pp.tests.test_ppval_script module fre.pp.tests.test_rose_quoting module fre.pp.tests.test_split_netcdf module fre.pp.tests.test_split_netcdf_regex module fre.pp.trigger_script module fre.pp.validate_script module fre.pp.wrapper_script module fre.run module fre.run.frerun module fre.run.frerunexample module fre.tests module fre.tests.test_fre_analysis_cli module fre.tests.test_fre_app_cli module fre.tests.test_fre_catalog_cli module fre.tests.test_fre_check_cli module fre.tests.test_fre_cli module fre.tests.test_fre_cmor_cli module fre.tests.test_fre_list_cli module fre.tests.test_fre_make_cli module fre.tests.test_fre_pp_cli module fre.tests.test_fre_run_cli module fre.tests.test_fre_yamltools_cli module fre.yamltools module fre.yamltools.abstract_classes module fre.yamltools.combine_yamls_script module fre.yamltools.constructors module fre.yamltools.freyamltools module fre.yamltools.helpers module fre.yamltools.tests module fre.yamltools.tests.test_combine_yamls_script module fre.yamltools.tests.test_helpers module fre_outfile_name() (in module fre.pp.split_netcdf_script) fremake_run() (in module fre.make.run_fremake_script) frenctoolsTimeAverager (class in fre.app.generate_time_averages.frenctoolsTimeAverager) frepytoolsTimeAverager (class in fre.app.generate_time_averages.frepytoolsTimeAverager) freq_to_date_format() (in module fre.app.remap_pp_components.remap_pp_components) freq_to_legacy() (in module fre.app.remap_pp_components.remap_pp_components) from_dis_gimme_dis() (in module fre.cmor.cmor_helpers)

G

generate() (in module fre.app.generate_time_averages.generate_time_averages) generate_regex() (in module fre.pp.tests.test_split_netcdf_regex) generate_timavg() (fre.app.generate_time_averages.cdoTimeAverager.cdoTimeAverager method) (fre.app.generate_time_averages.frenctoolsTimeAverager.frenctoolsTimeAverager method) (fre.app.generate_time_averages.frepytoolsTimeAverager.frepytoolsTimeAverager method) (fre.app.generate_time_averages.timeAverager.timeAverager method) generate_time_average() (in module fre.app.generate_time_averages.generate_time_averages) generate_wrapper() (in module fre.app.generate_time_averages.wrapper) get_bronx_freq_from_mip_table() (in module fre.cmor.cmor_helpers) get_chunk() (in module fre.app.remap_pp_components.remap_pp_components) get_combined_cmoryaml() (in module fre.yamltools.combine_yamls_script) get_command() (fre.lazy_group.LazyGroup method) get_freq() (in module fre.app.remap_pp_components.remap_pp_components)

get_grid_spec() (in module fre.app.regrid_xy.regrid_xy) get_input_file() (in module fre.app.regrid_xy.regrid_xy) get_input_mosaic() (in module fre.app.regrid_xy.regrid_xy) get_iso_datetime_ranges() (in module fre.cmor.cmor_helpers) get_json_file_data() (in module fre.cmor.cmor_helpers) get_max_ndims() (in module fre.pp.split_netcdf_script) get_mktemplate_path() (in module fre.make.make_helpers) get_remap_file() (in module fre.app.regrid_xy.regrid_xy) get_scalar_fields() (in module fre.app.regrid_xy.regrid_xy) get_sources() (in module fre.app.remap_pp_components.remap_pp_components) get_variables() (in module fre.app.helpers) get_varlist() (in module fre.app.remap_pp_components.remap_pp_components) get_vertical_dimension() (in module fre.cmor.cmor_helpers) getenot() (in module fre.pp.ppval_script)

I

install_analysis_package() (in module fre.analysis.subtools)

install_subtool() (in module fre.pp.install_script) iso_to_bronx_chunk() (in module fre.cmor.cmor_helpers)

L

LazyGroup (class in fre.lazy_group) list_commands() (fre.lazy_group.LazyGroup method) list_experiments_subtool() (in module fre.list_.list_experiments_script)

list_platforms_subtool() (in module fre.list_.list_platforms_script) list_plugins() (in module fre.analysis.subtools) list_ppcomps_subtool() (in module fre.list_.list_pp_components_script)

M

make_all() (in module fre.app.regrid_xy.tests.generate_files) make_data() (in module fre.app.regrid_xy.tests.generate_files) make_experiment_yaml() (in module fre.analysis.tests.test_subtools) make_grid() (in module fre.app.regrid_xy.tests.generate_files) make_grid_spec() (in module fre.app.regrid_xy.tests.generate_files) make_mosaic() (in module fre.app.regrid_xy.tests.generate_files) make_simple_varlist() (in module fre.cmor.cmor_finder) make_workflow_name() (in module fre.pp) make_yaml() (in module fre.app.regrid_xy.tests.generate_files) makefile_create() (in module fre.make.create_makefile_script) mask_atmos_plevel_subtool() (in module fre.app.mask_atmos_plevel.mask_atmos_plevel) mask_field_above_surface_pressure() (in module fre.app.mask_atmos_plevel.mask_atmos_plevel) merge_multiple_yamls() (fre.yamltools.abstract_classes.MergePPANYamls method) merge_netcdfs() (in module fre.app.generate_time_averages.combine) MergeCompileYamls (class in fre.yamltools.abstract_classes) MergePPANYamls (class in fre.yamltools.abstract_classes) MockMakefileObject (class in fre.make.tests.test_makefilefre_linkline) module fre fre.analysis fre.analysis.freanalysis fre.analysis.subtools fre.analysis.tests fre.analysis.tests.test_subtools fre.app fre.app.freapp fre.app.generate_time_averages fre.app.generate_time_averages.cdoTimeAverager fre.app.generate_time_averages.combine fre.app.generate_time_averages.frenctoolsTimeAverager fre.app.generate_time_averages.frepytoolsTimeAverager fre.app.generate_time_averages.generate_time_averages fre.app.generate_time_averages.tests fre.app.generate_time_averages.tests.test_cdoTimeAverager fre.app.generate_time_averages.tests.test_combine fre.app.generate_time_averages.tests.test_generate_time_averages fre.app.generate_time_averages.tests.test_wrapper fre.app.generate_time_averages.timeAverager fre.app.generate_time_averages.wrapper fre.app.helpers fre.app.mask_atmos_plevel fre.app.mask_atmos_plevel.mask_atmos_plevel fre.app.mask_atmos_plevel.tests fre.app.mask_atmos_plevel.tests.test_mask_atmos_plevel fre.app.regrid_xy fre.app.regrid_xy.regrid_xy fre.app.regrid_xy.tests fre.app.regrid_xy.tests.generate_files fre.app.regrid_xy.tests.test_regrid_xy fre.app.remap_pp_components fre.app.remap_pp_components.remap_pp_components fre.app.remap_pp_components.tests fre.app.remap_pp_components.tests.test_remap_pp_components fre.app.tests fre.app.tests.test_helpers fre.catalog fre.catalog.frecatalog fre.catalog.tests fre.catalog.tests.test_fre_catalog fre.check fre.check.frecheck fre.check.frecheckexample fre.cmor fre.cmor.cmor_config fre.cmor.cmor_constants fre.cmor.cmor_finder fre.cmor.cmor_helpers fre.cmor.cmor_mixer fre.cmor.cmor_yamler fre.cmor.frecmor fre.cmor.tests fre.cmor.tests.test_cmor_config_subtool fre.cmor.tests.test_cmor_find_subtool fre.cmor.tests.test_cmor_finder_make_simple_varlist fre.cmor.tests.test_cmor_helpers fre.cmor.tests.test_cmor_helpers_update_calendar fre.cmor.tests.test_cmor_helpers_update_grid_label fre.cmor.tests.test_cmor_mixer_calendar_integration fre.cmor.tests.test_cmor_run_subtool fre.cmor.tests.test_cmor_run_subtool_further_examples fre.cmor.tests.test_cmor_yamler fre.cmor.tests.test_cmor_yamler_freq_validation fre.cmor.tests.test_cmor_yamler_subtool fre.fre fre.lazy_group fre.list_ fre.list_.frelist fre.list_.list_experiments_script fre.list_.list_platforms_script fre.list_.list_pp_components_script fre.list_.tests fre.list_.tests.test_list_experiments_script fre.list_.tests.test_list_platforms_script fre.list_.tests.test_list_pp_components_script fre.make fre.make.create_checkout_script fre.make.create_compile_script fre.make.create_docker_script fre.make.create_makefile_script fre.make.fremake fre.make.make_helpers fre.make.run_fremake_script fre.make.tests fre.make.tests.compilation fre.make.tests.compilation.test_run_fremake_builds fre.make.tests.test_create_checkout fre.make.tests.test_create_compile fre.make.tests.test_create_dockerfile fre.make.tests.test_create_makefile fre.make.tests.test_make_helpers fre.make.tests.test_makefilefre_linkline fre.make.tests.test_run_fremake fre.pp fre.pp.checkout_script fre.pp.configure_script_yaml fre.pp.frepp fre.pp.histval_script fre.pp.install_script fre.pp.nccheck_script fre.pp.ppval_script fre.pp.run_script fre.pp.split_netcdf_script fre.pp.status_script fre.pp.tests fre.pp.tests.test_configure_script_yaml fre.pp.tests.test_fre_pp_init fre.pp.tests.test_histval_script fre.pp.tests.test_nccheck_script fre.pp.tests.test_ppval_script fre.pp.tests.test_rose_quoting fre.pp.tests.test_split_netcdf fre.pp.tests.test_split_netcdf_regex fre.pp.trigger_script fre.pp.validate_script fre.pp.wrapper_script fre.run fre.run.frerun fre.run.frerunexample fre.tests fre.tests.test_fre_analysis_cli fre.tests.test_fre_app_cli fre.tests.test_fre_catalog_cli fre.tests.test_fre_check_cli fre.tests.test_fre_cli fre.tests.test_fre_cmor_cli fre.tests.test_fre_list_cli fre.tests.test_fre_make_cli fre.tests.test_fre_pp_cli fre.tests.test_fre_run_cli fre.tests.test_fre_yamltools_cli fre.yamltools fre.yamltools.abstract_classes fre.yamltools.combine_yamls_script fre.yamltools.constructors fre.yamltools.freyamltools fre.yamltools.helpers fre.yamltools.tests fre.yamltools.tests.test_combine_yamls_script fre.yamltools.tests.test_helpers

O

output_yaml() (in module fre.yamltools.helpers)

P

pkg (fre.app.generate_time_averages.timeAverager.timeAverager attribute) pp_run_subtool() (in module fre.pp.run_script)

pressure_coordinate() (in module fre.app.mask_atmos_plevel.mask_atmos_plevel) print_data_minmax() (in module fre.cmor.cmor_helpers) print_var_content() (in module fre.cmor.cmor_finder)

Q

quote_rose_values() (in module fre.pp.configure_script_yaml)

R

regrid_xy() (in module fre.app.regrid_xy.regrid_xy) remap_pp_components() (in module fre.app.remap_pp_components.remap_pp_components) rewrite_netcdf_file_var() (in module fre.cmor.cmor_mixer)

rose_init() (in module fre.pp.configure_script_yaml) run_all_fre_pp_steps() (in module fre.pp.wrapper_script) run_analysis() (in module fre.analysis.subtools) run_test_function() (in module fre.run.frerunexample)

S

search_files() (in module fre.app.remap_pp_components.remap_pp_components) set_coord_encoding() (in module fre.pp.split_netcdf_script) set_rose_apps() (in module fre.pp.configure_script_yaml) set_rose_suite() (in module fre.pp.configure_script_yaml) set_test() (in module fre.app.regrid_xy.tests.generate_files) set_var_encoding() (in module fre.pp.split_netcdf_script)

setup_test() (in module fre.app.regrid_xy.tests.test_regrid_xy) setup_test_files() (in module fre.app.generate_time_averages.tests.test_generate_time_averages) setup_two_test_files() (in module fre.app.generate_time_averages.tests.test_generate_time_averages) split_file_xarray() (in module fre.pp.split_netcdf_script) split_netcdf() (in module fre.pp.split_netcdf_script) status_subtool() (in module fre.pp.status_script)

T

table_config_file() (in module fre.cmor.tests.test_cmor_mixer_calendar_integration) temp_dir() (in module fre.cmor.tests.test_cmor_config_subtool) (in module fre.cmor.tests.test_cmor_find_subtool) temp_json_file() (in module fre.cmor.tests.test_cmor_helpers_update_calendar) (in module fre.cmor.tests.test_cmor_helpers_update_grid_label) temp_jsondecodeerr_json_file() (in module fre.cmor.tests.test_cmor_helpers_update_calendar) temp_keyerr_json_file() (in module fre.cmor.tests.test_cmor_helpers_update_calendar) temp_netcdf_dir() (in module fre.cmor.tests.test_cmor_finder_make_simple_varlist) temp_netcdf_dir_single_file() (in module fre.cmor.tests.test_cmor_finder_make_simple_varlist) temp_path() (in module fre.yamltools.tests.test_helpers) test_analysisyaml_exists() (in module fre.yamltools.tests.test_combine_yamls_script) test_annual_av_from_annual_ts() (in module fre.app.generate_time_averages.tests.test_wrapper) test_annual_av_from_monthly_ts() (in module fre.app.generate_time_averages.tests.test_wrapper) test_bad_platform() (in module fre.make.tests.test_create_compile) test_bad_platform_compilelog() (in module fre.make.tests.test_create_compile) test_bad_platform_option() (in module fre.make.tests.test_create_dockerfile) (in module fre.make.tests.test_run_fremake) test_bad_target() (in module fre.make.tests.test_create_compile) test_bad_target_compilelog() (in module fre.make.tests.test_create_compile) test_bad_target_option() (in module fre.make.tests.test_create_dockerfile) (in module fre.make.tests.test_run_fremake) test_bad_yamlpath_option() (in module fre.make.tests.test_create_dockerfile) (in module fre.make.tests.test_run_fremake) test_bm_checkout_force_checkout() (in module fre.make.tests.test_create_checkout) test_bm_makefile_creation() (in module fre.make.tests.test_create_makefile) test_boolean() (in module fre.pp.tests.test_rose_quoting) test_build_script_contents() (in module fre.make.tests.test_create_dockerfile) test_case_function() (in module fre.cmor.tests.test_cmor_run_subtool_further_examples) test_cdl_file_exists() (in module fre.app.remap_pp_components.tests.test_remap_pp_components) test_cdo_annual_av_from_annual_ts() (in module fre.app.generate_time_averages.tests.test_wrapper) test_cdo_annual_av_from_monthly_ts() (in module fre.app.generate_time_averages.tests.test_wrapper) test_cdo_fre_nctools_equivalence() (in module fre.app.generate_time_averages.tests.test_wrapper) test_cdo_monthly_av_from_monthly_ts() (in module fre.app.generate_time_averages.tests.test_wrapper) test_cdotimavg_init_error() (in module fre.app.generate_time_averages.tests.test_cdoTimeAverager) test_change_directory() (in module fre.app.tests.test_helpers) test_check_expected_platformyamlcontent() (in module fre.yamltools.tests.test_combine_yamls_script) test_checkout_execute() (in module fre.make.tests.test_create_checkout) test_checkout_no_parallel_checkout() (in module fre.make.tests.test_create_checkout) test_checkout_script_exists() (in module fre.make.tests.test_create_checkout) test_cleanup() (in module fre.pp.tests.test_configure_script_yaml) test_cli_fre() (in module fre.tests.test_fre_cli) test_cli_fre_analysis() (in module fre.tests.test_fre_analysis_cli) test_cli_fre_analysis_help() (in module fre.tests.test_fre_analysis_cli) test_cli_fre_analysis_install_help() (in module fre.tests.test_fre_analysis_cli) test_cli_fre_analysis_install_missing_url() (in module fre.tests.test_fre_analysis_cli) test_cli_fre_analysis_install_unknown_argument() (in module fre.tests.test_fre_analysis_cli) test_cli_fre_analysis_run_help() (in module fre.tests.test_fre_analysis_cli) test_cli_fre_analysis_run_missing_catalog() (in module fre.tests.test_fre_analysis_cli) test_cli_fre_analysis_run_missing_experiment_yaml() (in module fre.tests.test_fre_analysis_cli) test_cli_fre_analysis_run_missing_name() (in module fre.tests.test_fre_analysis_cli) test_cli_fre_analysis_run_missing_output_directory() (in module fre.tests.test_fre_analysis_cli) test_cli_fre_analysis_run_missing_output_yaml() (in module fre.tests.test_fre_analysis_cli) test_cli_fre_analysis_run_unknown_argument() (in module fre.tests.test_fre_analysis_cli) test_cli_fre_analysis_uninstall_help() (in module fre.tests.test_fre_analysis_cli) test_cli_fre_analysis_uninstall_missing_name() (in module fre.tests.test_fre_analysis_cli) test_cli_fre_analysis_uninstall_unknown_argument() (in module fre.tests.test_fre_analysis_cli) test_cli_fre_app() (in module fre.tests.test_fre_app_cli) test_cli_fre_app_combine_time_averages() (in module fre.tests.test_fre_app_cli) test_cli_fre_app_combine_time_averages_case() (in module fre.tests.test_fre_app_cli) test_cli_fre_app_combine_time_averages_help() (in module fre.tests.test_fre_app_cli) test_cli_fre_app_combine_time_averages_opt_dne() (in module fre.tests.test_fre_app_cli) test_cli_fre_app_gen_time_averages() (in module fre.tests.test_fre_app_cli) test_cli_fre_app_gen_time_averages_case() (in module fre.tests.test_fre_app_cli) test_cli_fre_app_gen_time_averages_help() (in module fre.tests.test_fre_app_cli) test_cli_fre_app_gen_time_averages_opt_dne() (in module fre.tests.test_fre_app_cli) test_cli_fre_app_gen_time_averages_wrapper() (in module fre.tests.test_fre_app_cli) test_cli_fre_app_gen_time_averages_wrapper_case() (in module fre.tests.test_fre_app_cli) test_cli_fre_app_gen_time_averages_wrapper_help() (in module fre.tests.test_fre_app_cli) test_cli_fre_app_gen_time_averages_wrapper_opt_dne() (in module fre.tests.test_fre_app_cli) test_cli_fre_app_help() (in module fre.tests.test_fre_app_cli) test_cli_fre_app_mask_atmos_plevel() (in module fre.tests.test_fre_app_cli) test_cli_fre_app_mask_atmos_plevel_exception() (in module fre.tests.test_fre_app_cli) test_cli_fre_app_mask_atmos_plevel_help() (in module fre.tests.test_fre_app_cli) test_cli_fre_app_mask_atmos_plevel_opt_dne() (in module fre.tests.test_fre_app_cli) test_cli_fre_app_opt_dne() (in module fre.tests.test_fre_app_cli) test_cli_fre_app_regrid() (in module fre.tests.test_fre_app_cli) test_cli_fre_app_regrid_help() (in module fre.tests.test_fre_app_cli) test_cli_fre_app_regrid_opt_dne() (in module fre.tests.test_fre_app_cli) test_cli_fre_app_regrid_test_case_1() (in module fre.tests.test_fre_app_cli) test_cli_fre_app_remap() (in module fre.tests.test_fre_app_cli) test_cli_fre_app_remap_help() (in module fre.tests.test_fre_app_cli) test_cli_fre_app_remap_opt_dne() (in module fre.tests.test_fre_app_cli) test_cli_fre_catalog() (in module fre.tests.test_fre_catalog_cli) test_cli_fre_catalog_build() (in module fre.tests.test_fre_catalog_cli) test_cli_fre_catalog_build_help() (in module fre.tests.test_fre_catalog_cli) test_cli_fre_catalog_help() (in module fre.tests.test_fre_catalog_cli) test_cli_fre_catalog_merge() (in module fre.tests.test_fre_catalog_cli) test_cli_fre_catalog_merge_help() (in module fre.tests.test_fre_catalog_cli) test_cli_fre_catalog_opt_dne() (in module fre.tests.test_fre_catalog_cli) test_cli_fre_check() (in module fre.tests.test_fre_check_cli) test_cli_fre_check_help() (in module fre.tests.test_fre_check_cli) test_cli_fre_check_opt_dne() (in module fre.tests.test_fre_check_cli) test_cli_fre_cmor() (in module fre.tests.test_fre_cmor_cli) test_cli_fre_cmor_config() (in module fre.tests.test_fre_cmor_cli) test_cli_fre_cmor_config_case1() (in module fre.tests.test_fre_cmor_cli) test_cli_fre_cmor_config_help() (in module fre.tests.test_fre_cmor_cli) test_cli_fre_cmor_config_opt_dne() (in module fre.tests.test_fre_cmor_cli) test_cli_fre_cmor_find() (in module fre.tests.test_fre_cmor_cli) test_cli_fre_cmor_find_cmip6_case1() (in module fre.tests.test_fre_cmor_cli) test_cli_fre_cmor_find_cmip6_case2() (in module fre.tests.test_fre_cmor_cli) test_cli_fre_cmor_find_help() (in module fre.tests.test_fre_cmor_cli) test_cli_fre_cmor_find_opt_dne() (in module fre.tests.test_fre_cmor_cli) test_cli_fre_cmor_help() (in module fre.tests.test_fre_cmor_cli) test_cli_fre_cmor_help_and_debuglog() (in module fre.tests.test_fre_cmor_cli) test_cli_fre_cmor_help_and_infolog() (in module fre.tests.test_fre_cmor_cli) test_cli_fre_cmor_help_and_quietlog() (in module fre.tests.test_fre_cmor_cli) test_cli_fre_cmor_opt_dne() (in module fre.tests.test_fre_cmor_cli) test_cli_fre_cmor_run() (in module fre.tests.test_fre_cmor_cli) test_cli_fre_cmor_run_case1() (in module fre.tests.test_fre_cmor_cli) test_cli_fre_cmor_run_case2() (in module fre.tests.test_fre_cmor_cli) test_cli_fre_cmor_run_cmip7_case1() (in module fre.tests.test_fre_cmor_cli) test_cli_fre_cmor_run_cmip7_case2() (in module fre.tests.test_fre_cmor_cli) test_cli_fre_cmor_run_help() (in module fre.tests.test_fre_cmor_cli) test_cli_fre_cmor_run_opt_dne() (in module fre.tests.test_fre_cmor_cli) test_cli_fre_cmor_varlist() (in module fre.tests.test_fre_cmor_cli) test_cli_fre_cmor_varlist_cmip6_table_filter() (in module fre.tests.test_fre_cmor_cli) test_cli_fre_cmor_varlist_cmip7_table_filter() (in module fre.tests.test_fre_cmor_cli) test_cli_fre_cmor_varlist_help() (in module fre.tests.test_fre_cmor_cli) test_cli_fre_cmor_varlist_no_table_filter() (in module fre.tests.test_fre_cmor_cli) test_cli_fre_cmor_varlist_opt_dne() (in module fre.tests.test_fre_cmor_cli) test_cli_fre_cmor_yaml() (in module fre.tests.test_fre_cmor_cli) test_cli_fre_cmor_yaml_case1() (in module fre.tests.test_fre_cmor_cli) test_cli_fre_cmor_yaml_help() (in module fre.tests.test_fre_cmor_cli) test_cli_fre_cmor_yaml_opt_dne() (in module fre.tests.test_fre_cmor_cli) test_cli_fre_help() (in module fre.tests.test_fre_cli) test_cli_fre_list() (in module fre.tests.test_fre_list_cli) test_cli_fre_list_exps() (in module fre.tests.test_fre_list_cli) test_cli_fre_list_exps_help() (in module fre.tests.test_fre_list_cli) test_cli_fre_list_exps_opt_dne() (in module fre.tests.test_fre_list_cli) test_cli_fre_list_help() (in module fre.tests.test_fre_list_cli) test_cli_fre_list_opt_dne() (in module fre.tests.test_fre_list_cli) test_cli_fre_list_platforms() (in module fre.tests.test_fre_list_cli) test_cli_fre_make() (in module fre.tests.test_fre_make_cli) test_cli_fre_make_create_checkout_baremetal() (in module fre.tests.test_fre_make_cli) test_cli_fre_make_create_checkout_baremetal_npc() (in module fre.tests.test_fre_make_cli) test_cli_fre_make_create_checkout_cleanup() (in module fre.tests.test_fre_make_cli) test_cli_fre_make_create_checkout_container() (in module fre.tests.test_fre_make_cli) test_cli_fre_make_help() (in module fre.tests.test_fre_make_cli) test_cli_fre_make_opt_dne() (in module fre.tests.test_fre_make_cli) test_cli_fre_option_dne() (in module fre.tests.test_fre_cli) test_cli_fre_pp() (in module fre.tests.test_fre_pp_cli) test_cli_fre_pp_checkout() (in module fre.tests.test_fre_pp_cli) test_cli_fre_pp_checkout_case() (in module fre.tests.test_fre_pp_cli) test_cli_fre_pp_checkout_help() (in module fre.tests.test_fre_pp_cli) test_cli_fre_pp_checkout_opt_dne() (in module fre.tests.test_fre_pp_cli) test_cli_fre_pp_configure_yaml() (in module fre.tests.test_fre_pp_cli) test_cli_fre_pp_configure_yaml_fail1() (in module fre.tests.test_fre_pp_cli) test_cli_fre_pp_configure_yaml_help() (in module fre.tests.test_fre_pp_cli) test_cli_fre_pp_configure_yaml_opt_dne() (in module fre.tests.test_fre_pp_cli) test_cli_fre_pp_help() (in module fre.tests.test_fre_pp_cli) test_cli_fre_pp_install() (in module fre.tests.test_fre_pp_cli) test_cli_fre_pp_install_help() (in module fre.tests.test_fre_pp_cli) test_cli_fre_pp_install_opt_dne() (in module fre.tests.test_fre_pp_cli) test_cli_fre_pp_opt_dne() (in module fre.tests.test_fre_pp_cli) test_cli_fre_pp_run() (in module fre.tests.test_fre_pp_cli) test_cli_fre_pp_run_help() (in module fre.tests.test_fre_pp_cli) test_cli_fre_pp_run_opt_dne() (in module fre.tests.test_fre_pp_cli) test_cli_fre_pp_split_netcdf() (in module fre.tests.test_fre_pp_cli) test_cli_fre_pp_split_netcdf_help() (in module fre.tests.test_fre_pp_cli) test_cli_fre_pp_split_netcdf_opt_dne() (in module fre.tests.test_fre_pp_cli) test_cli_fre_pp_split_netcdf_wrapper() (in module fre.tests.test_fre_pp_cli) test_cli_fre_pp_split_netcdf_wrapper_help() (in module fre.tests.test_fre_pp_cli) test_cli_fre_pp_split_netcdf_wrapper_opt_dne() (in module fre.tests.test_fre_pp_cli) test_cli_fre_pp_status() (in module fre.tests.test_fre_pp_cli) test_cli_fre_pp_status_help() (in module fre.tests.test_fre_pp_cli) test_cli_fre_pp_status_opt_dne() (in module fre.tests.test_fre_pp_cli) test_cli_fre_pp_status_security_check() (in module fre.tests.test_fre_pp_cli) test_cli_fre_pp_validate() (in module fre.tests.test_fre_pp_cli) test_cli_fre_pp_validate_help() (in module fre.tests.test_fre_pp_cli) test_cli_fre_pp_validate_opt_dne() (in module fre.tests.test_fre_pp_cli) test_cli_fre_pp_wrapper() (in module fre.tests.test_fre_pp_cli) test_cli_fre_pp_wrapper_help() (in module fre.tests.test_fre_pp_cli) test_cli_fre_pp_wrapper_opt_dne() (in module fre.tests.test_fre_pp_cli) test_cli_fre_run() (in module fre.tests.test_fre_run_cli) test_cli_fre_run_help() (in module fre.tests.test_fre_run_cli) test_cli_fre_run_opt_dne() (in module fre.tests.test_fre_run_cli) test_cli_fre_version() (in module fre.tests.test_fre_cli) test_cli_fre_yamltools() (in module fre.tests.test_fre_yamltools_cli) test_cli_fre_yamltools_combine_cmoryaml() (in module fre.tests.test_fre_yamltools_cli) test_cli_fre_yamltools_combine_help() (in module fre.tests.test_fre_yamltools_cli) test_cli_fre_yamltools_combine_opt_dne() (in module fre.tests.test_fre_yamltools_cli) test_cli_fre_yamltools_help() (in module fre.tests.test_fre_yamltools_cli) test_cli_fre_yamltools_opt_dne() (in module fre.tests.test_fre_yamltools_cli) test_cmip6_freq_none_derivation_exception_caught() (in module fre.cmor.tests.test_cmor_yamler_subtool) test_cmip6_freq_none_derivation_succeeds() (in module fre.cmor.tests.test_cmor_yamler_subtool) test_cmip6_freq_none_no_derivation_raises() (in module fre.cmor.tests.test_cmor_yamler_subtool) test_cmip7_freq_none_raises() (in module fre.cmor.tests.test_cmor_yamler_subtool) test_cmor_config_subtool_noexpcfg_err() (in module fre.cmor.tests.test_cmor_config_subtool) test_cmor_config_subtool_nomip6_tables_in_mip7_tables_err() (in module fre.cmor.tests.test_cmor_config_subtool) test_cmor_config_subtool_nomip7_tables_in_mip6_tables_err() (in module fre.cmor.tests.test_cmor_config_subtool) test_cmor_config_subtool_noppdir_err() (in module fre.cmor.tests.test_cmor_config_subtool) test_cmor_config_subtool_notabledir_err() (in module fre.cmor.tests.test_cmor_config_subtool) test_cmor_run_no_cal_type() (in module fre.cmor.tests.test_cmor_mixer_calendar_integration) test_cmor_run_subtool_raise_value_error() (in module fre.cmor.tests.test_cmor_run_subtool) test_cmor_run_w_cal_type() (in module fre.cmor.tests.test_cmor_mixer_calendar_integration) test_cmor_yaml_subtool_dry_run_false() (in module fre.cmor.tests.test_cmor_yamler_subtool) test_combine_annual_av() (in module fre.app.generate_time_averages.tests.test_combine) test_combine_cmor_yaml() (in module fre.yamltools.tests.test_combine_yamls_script) test_combine_monthly_av() (in module fre.app.generate_time_averages.tests.test_combine) test_combine_pp_yamls() (in module fre.yamltools.tests.test_combine_yamls_script) test_combined_compileyaml_combinefail() (in module fre.yamltools.tests.test_combine_yamls_script) test_combined_compileyaml_validatefail() (in module fre.yamltools.tests.test_combine_yamls_script) test_combined_compileyaml_validation() (in module fre.yamltools.tests.test_combine_yamls_script) test_combined_ppyaml_validation() (in module fre.yamltools.tests.test_combine_yamls_script) test_combinedyaml_exists() (in module fre.pp.tests.test_configure_script_yaml) test_compare_cdo_to_fre_nctools() (in module fre.app.generate_time_averages.tests.test_generate_time_averages) test_compare_fre_cli_to_cdo() (in module fre.app.generate_time_averages.tests.test_generate_time_averages) test_compare_fre_cli_to_fre_nctools() (in module fre.app.generate_time_averages.tests.test_generate_time_averages) test_compare_unwgt_fre_cli_to_unwgt_cdo() (in module fre.app.generate_time_averages.tests.test_generate_time_averages) test_compile_creation() (in module fre.make.tests.test_create_compile) test_compile_executable_failure() (in module fre.make.tests.test_create_compile) test_compileyaml_exists() (in module fre.list_.tests.test_list_platforms_script) (in module fre.make.tests.test_create_compile) (in module fre.make.tests.test_create_dockerfile) (in module fre.make.tests.test_create_makefile) (in module fre.make.tests.test_run_fremake) (in module fre.yamltools.tests.test_combine_yamls_script) test_configure_script() (in module fre.pp.tests.test_configure_script_yaml) test_container2step_makefile_creation() (in module fre.make.tests.test_create_makefile) test_container_build_script_creation() (in module fre.make.tests.test_create_dockerfile) test_container_checkout_force_checkout() (in module fre.make.tests.test_create_checkout) test_container_dir_creation() (in module fre.make.tests.test_create_dockerfile) test_container_makefile_creation() (in module fre.make.tests.test_create_makefile) test_conv_mip_to_bronx_freq_case_sensitivity() (in module fre.cmor.tests.test_cmor_yamler_freq_validation) test_conv_mip_to_bronx_freq_edge_cases() (in module fre.cmor.tests.test_cmor_yamler_freq_validation) test_conv_mip_to_bronx_freq_invalid_frequency() (in module fre.cmor.tests.test_cmor_yamler_freq_validation) test_conv_mip_to_bronx_freq_valid_frequencies() (in module fre.cmor.tests.test_cmor_yamler_freq_validation) test_create_dockerfile() (in module fre.make.tests.test_create_dockerfile) test_create_lev_bnds_length_mismatch() (in module fre.cmor.tests.test_cmor_helpers) test_create_lev_bnds_length_mismatch_too_long() (in module fre.cmor.tests.test_cmor_helpers) test_create_ncfile_with_ncgen_cdl() (in module fre.app.remap_pp_components.tests.test_remap_pp_components) test_create_static_ncfile_with_ncgen_cdl() (in module fre.app.remap_pp_components.tests.test_remap_pp_components) test_create_tmp_dir_oserror() (in module fre.cmor.tests.test_cmor_helpers) test_create_tmp_dir_success() (in module fre.cmor.tests.test_cmor_helpers) test_create_tmp_dir_with_exp_config() (in module fre.cmor.tests.test_cmor_helpers) test_dockerfile_contents() (in module fre.make.tests.test_create_dockerfile)

test_dockerfile_creation() (in module fre.make.tests.test_create_dockerfile) test_dry_run_prints_cli_call() (in module fre.cmor.tests.test_cmor_yamler_subtool) test_dry_run_prints_python_call() (in module fre.cmor.tests.test_cmor_yamler_subtool) test_exp_json_does_not_exist() (in module fre.cmor.tests.test_cmor_yamler_subtool) test_exp_list() (in module fre.list_.tests.test_list_experiments_script) (in module fre.list_.tests.test_list_pp_components_script) test_expyaml_exists() (in module fre.yamltools.tests.test_combine_yamls_script) test_filter_brands_all_eliminated() (in module fre.cmor.tests.test_cmor_helpers) test_filter_brands_multiple_remain() (in module fre.cmor.tests.test_cmor_helpers) test_filter_brands_time_filter_selects_inst() (in module fre.cmor.tests.test_cmor_helpers) test_filter_brands_time_filter_selects_mean() (in module fre.cmor.tests.test_cmor_helpers) test_filter_brands_vertical_filter() (in module fre.cmor.tests.test_cmor_helpers) test_find_gold_ocean_statics_file_archive_missing() (in module fre.cmor.tests.test_cmor_helpers) test_find_gold_ocean_statics_file_mock_copy() (in module fre.cmor.tests.test_cmor_helpers) test_find_gold_ocean_statics_file_none_arg() (in module fre.cmor.tests.test_cmor_helpers) test_find_statics_file_nothing_found() (in module fre.cmor.tests.test_cmor_helpers) test_find_statics_file_success() (in module fre.cmor.tests.test_cmor_helpers) test_find_subtool_no_json_dir_err() (in module fre.cmor.tests.test_cmor_find_subtool) test_find_subtool_no_json_files_in_dir_err() (in module fre.cmor.tests.test_cmor_find_subtool) test_find_subtool_no_varlist_no_optvarname_err() (in module fre.cmor.tests.test_cmor_find_subtool) test_fre_app_gen_time_avg_test_data_cleanup() (in module fre.app.generate_time_averages.tests.test_generate_time_averages) test_fre_catalog_import() (in module fre.catalog.tests.test_fre_catalog) test_fre_cmor_run_subtool_case1() (in module fre.cmor.tests.test_cmor_run_subtool) test_fre_cmor_run_subtool_case1_output_compare_data() (in module fre.cmor.tests.test_cmor_run_subtool) test_fre_cmor_run_subtool_case1_output_compare_metadata() (in module fre.cmor.tests.test_cmor_run_subtool) test_fre_cmor_run_subtool_case2() (in module fre.cmor.tests.test_cmor_run_subtool) test_fre_cmor_run_subtool_case2_output_compare_data() (in module fre.cmor.tests.test_cmor_run_subtool) test_fre_cmor_run_subtool_case2_output_compare_metadata() (in module fre.cmor.tests.test_cmor_run_subtool) test_fre_cmor_run_subtool_empty_varlist() (in module fre.cmor.tests.test_cmor_run_subtool) test_fre_cmor_run_subtool_missing_mip_era() (in module fre.cmor.tests.test_cmor_run_subtool) test_fre_cmor_run_subtool_no_exp_config() (in module fre.cmor.tests.test_cmor_run_subtool) test_fre_cmor_run_subtool_opt_var_name_not_in_table() (in module fre.cmor.tests.test_cmor_run_subtool) test_fre_cmor_run_subtool_unsupported_mip_era() (in module fre.cmor.tests.test_cmor_run_subtool) test_fre_version() (in module fre.tests.test_fre_cli) test_freq_not_valid_valueerror() (in module fre.app.generate_time_averages.tests.test_combine) (in module fre.app.generate_time_averages.tests.test_wrapper) test_get_bronx_freq_from_mip_table_invalid_freq() (in module fre.cmor.tests.test_cmor_helpers) test_get_bronx_freq_from_mip_table_no_freq() (in module fre.cmor.tests.test_cmor_helpers) test_get_bronx_freq_from_mip_table_success() (in module fre.cmor.tests.test_cmor_helpers) test_get_input_file() (in module fre.app.regrid_xy.tests.test_regrid_xy) test_get_input_mosaic() (in module fre.app.regrid_xy.tests.test_regrid_xy) test_get_iso_datetime_ranges_no_filter() (in module fre.cmor.tests.test_cmor_helpers) test_get_iso_datetime_ranges_no_matches_raises() (in module fre.cmor.tests.test_cmor_helpers) test_get_iso_datetime_ranges_none_arr_raises() (in module fre.cmor.tests.test_cmor_helpers) test_get_iso_datetime_ranges_with_start() (in module fre.cmor.tests.test_cmor_helpers) test_get_iso_datetime_ranges_with_start_and_stop() (in module fre.cmor.tests.test_cmor_helpers) test_get_iso_datetime_ranges_with_stop() (in module fre.cmor.tests.test_cmor_helpers) test_get_json_file_data_invalid_json() (in module fre.cmor.tests.test_cmor_helpers) test_get_json_file_data_nonexistent() (in module fre.cmor.tests.test_cmor_helpers) test_get_json_file_data_success() (in module fre.cmor.tests.test_cmor_helpers) test_get_remap_file() (in module fre.app.regrid_xy.tests.test_regrid_xy) test_get_variables() (in module fre.app.tests.test_helpers) test_get_variables_err() (in module fre.app.tests.test_helpers) test_git_cleanup() (in module fre.cmor.tests.test_cmor_run_subtool) (in module fre.cmor.tests.test_cmor_run_subtool_further_examples) test_gridding_dict_has_none_value_raises() (in module fre.cmor.tests.test_cmor_yamler_subtool) test_histval() (in module fre.pp.tests.test_histval_script) test_install_analysis_package() (in module fre.analysis.tests.test_subtools) test_invalid_json_file() (in module fre.cmor.tests.test_cmor_helpers_update_grid_label) test_iso_to_bronx_chunk() (in module fre.cmor.tests.test_cmor_helpers) test_linklineBuild_baremetal_path() (in module fre.make.tests.test_makefilefre_linkline) test_linklineBuild_baremetal_path_no_libs() (in module fre.make.tests.test_makefilefre_linkline) test_linklineBuild_container_path() (in module fre.make.tests.test_makefilefre_linkline) test_linklineBuild_container_path_no_libs() (in module fre.make.tests.test_makefilefre_linkline) test_list() (in module fre.pp.tests.test_rose_quoting) test_make_simple_varlist() (in module fre.cmor.tests.test_cmor_find_subtool) test_make_simple_varlist_dedup_across_datetimes() (in module fre.cmor.tests.test_cmor_finder_make_simple_varlist) test_make_simple_varlist_deduplicates() (in module fre.cmor.tests.test_cmor_finder_make_simple_varlist) test_make_simple_varlist_index_error_on_datetime() (in module fre.cmor.tests.test_cmor_finder_make_simple_varlist) test_make_simple_varlist_invalid_output_path() (in module fre.cmor.tests.test_cmor_finder_make_simple_varlist) test_make_simple_varlist_mip_table_filter() (in module fre.cmor.tests.test_cmor_finder_make_simple_varlist) test_make_simple_varlist_mip_table_no_match() (in module fre.cmor.tests.test_cmor_finder_make_simple_varlist) test_make_simple_varlist_no_files() (in module fre.cmor.tests.test_cmor_finder_make_simple_varlist) test_make_simple_varlist_no_files_matching_pattern() (in module fre.cmor.tests.test_cmor_finder_make_simple_varlist) test_make_simple_varlist_no_matching_pattern() (in module fre.cmor.tests.test_cmor_finder_make_simple_varlist) test_make_simple_varlist_return_value_only() (in module fre.cmor.tests.test_cmor_finder_make_simple_varlist) test_make_simple_varlist_single_file_hits_warning() (in module fre.cmor.tests.test_cmor_finder_make_simple_varlist) test_make_simple_varlist_single_file_warning() (in module fre.cmor.tests.test_cmor_finder_make_simple_varlist) test_make_simple_varlist_success() (in module fre.cmor.tests.test_cmor_finder_make_simple_varlist) test_make_workflow_name() (in module fre.pp.tests.test_fre_pp_init) test_mask_atmos_plevel() (in module fre.app.mask_atmos_plevel.tests.test_mask_atmos_plevel) test_mask_atmos_plevel_case2() (in module fre.app.mask_atmos_plevel.tests.test_mask_atmos_plevel) test_mask_atmos_plevel_exception() (in module fre.app.mask_atmos_plevel.tests.test_mask_atmos_plevel) test_mask_atmos_plevel_no_missing_val() (in module fre.app.mask_atmos_plevel.tests.test_mask_atmos_plevel) test_mask_atmos_plevel_no_ps_error() (in module fre.app.mask_atmos_plevel.tests.test_mask_atmos_plevel) test_mask_atmos_plevel_no_ps_file_noop() (in module fre.app.mask_atmos_plevel.tests.test_mask_atmos_plevel) test_mask_atmos_plevel_no_ps_warn() (in module fre.app.mask_atmos_plevel.tests.test_mask_atmos_plevel) test_mask_atmos_plevel_pressure_mask_true() (in module fre.app.mask_atmos_plevel.tests.test_mask_atmos_plevel) test_mask_atmos_plevel_recreate_output() (in module fre.app.mask_atmos_plevel.tests.test_mask_atmos_plevel) test_merged_compile_yamls() (in module fre.yamltools.tests.test_combine_yamls_script) test_merged_pp_yamls() (in module fre.yamltools.tests.test_combine_yamls_script) test_mip_table_file_does_not_exist() (in module fre.cmor.tests.test_cmor_yamler_subtool) test_missing_grid_field() (in module fre.cmor.tests.test_cmor_helpers_update_grid_label) test_missing_grid_label_field() (in module fre.cmor.tests.test_cmor_helpers_update_grid_label) test_missing_nom_res_field() (in module fre.cmor.tests.test_cmor_helpers_update_grid_label) test_mktemplate_name() (in module fre.make.tests.test_make_helpers) test_mktemplate_name_container() (in module fre.make.tests.test_make_helpers) test_mktemplate_path_bm() (in module fre.make.tests.test_make_helpers) test_mktemplate_path_container() (in module fre.make.tests.test_make_helpers) test_mktemplatepath_dne_with_name() (in module fre.make.tests.test_make_helpers) test_mktemplatepath_dne_with_path() (in module fre.make.tests.test_make_helpers) test_modelyaml_dne_raise_filenotfound() (in module fre.cmor.tests.test_cmor_yamler) test_modelyaml_exists() (in module fre.list_.tests.test_list_experiments_script) (in module fre.list_.tests.test_list_platforms_script) (in module fre.list_.tests.test_list_pp_components_script) (in module fre.make.tests.test_create_compile) (in module fre.make.tests.test_create_dockerfile) (in module fre.make.tests.test_create_makefile) (in module fre.make.tests.test_run_fremake) (in module fre.yamltools.tests.test_combine_yamls_script) test_monthly_av_from_monthly_ts() (in module fre.app.generate_time_averages.tests.test_wrapper) test_multi_target() (in module fre.make.tests.test_create_compile) test_nccheck() (in module fre.pp.tests.test_nccheck_script) test_nccmp_ncgen_remap() (in module fre.app.remap_pp_components.tests.test_remap_pp_components) test_nccmp_ncgen_remap_ens_mem() (in module fre.app.remap_pp_components.tests.test_remap_pp_components) test_nccmp_ncgen_remap_statics() (in module fre.app.remap_pp_components.tests.test_remap_pp_components) test_no_op_platform() (in module fre.make.tests.test_create_dockerfile) test_no_req_arg_inputfile() (in module fre.app.generate_time_averages.tests.test_generate_time_averages) test_nonexistent_file() (in module fre.cmor.tests.test_cmor_helpers_update_grid_label) test_not_valid_yaml() (in module fre.list_.tests.test_list_platforms_script) test_nullyaml_exists() (in module fre.make.tests.test_create_checkout) test_nullyaml_filled() (in module fre.make.tests.test_create_checkout) test_outdir_creation_failure_raises_oserror() (in module fre.cmor.tests.test_cmor_yamler_subtool) test_outdir_creation_when_missing() (in module fre.cmor.tests.test_cmor_yamler_subtool) test_platforms_list_correct() (in module fre.list_.tests.test_list_platforms_script) test_platformyaml_exists() (in module fre.list_.tests.test_list_platforms_script) (in module fre.make.tests.test_create_compile) (in module fre.make.tests.test_create_dockerfile) (in module fre.make.tests.test_create_makefile) (in module fre.make.tests.test_run_fremake) (in module fre.yamltools.tests.test_combine_yamls_script) test_pp_dir_does_not_exist() (in module fre.cmor.tests.test_cmor_yamler_subtool) test_ppval() (in module fre.pp.tests.test_ppval_script) test_ppval_4xdaily() (in module fre.pp.tests.test_ppval_script) test_ppyamls_exist() (in module fre.list_.tests.test_list_pp_components_script) test_pressure_coordinate_continue_warning() (in module fre.app.mask_atmos_plevel.tests.test_mask_atmos_plevel) test_pressure_coordinate_found_no_long_name() (in module fre.app.mask_atmos_plevel.tests.test_mask_atmos_plevel) test_print_data_minmax_no_exception_case1() (in module fre.cmor.tests.test_cmor_helpers) test_print_data_minmax_no_exception_case2() (in module fre.cmor.tests.test_cmor_helpers) test_print_data_minmax_no_exception_case3() (in module fre.cmor.tests.test_cmor_helpers) test_regrid_xy() (in module fre.app.regrid_xy.tests.test_regrid_xy) test_regrid_xy_static() (in module fre.app.regrid_xy.tests.test_regrid_xy) test_remap_chdir() (in module fre.app.remap_pp_components.tests.test_remap_pp_components) test_remap_offline_diagnostics() (in module fre.app.remap_pp_components.tests.test_remap_pp_components) test_remap_pp_components() (in module fre.app.remap_pp_components.tests.test_remap_pp_components) test_remap_pp_components_begin_date_failure() (in module fre.app.remap_pp_components.tests.test_remap_pp_components) test_remap_pp_components_chunk_failure() (in module fre.app.remap_pp_components.tests.test_remap_pp_components) test_remap_pp_components_product_failure() (in module fre.app.remap_pp_components.tests.test_remap_pp_components) test_remap_pp_components_statics() (in module fre.app.remap_pp_components.tests.test_remap_pp_components) test_remap_pp_components_with_ensmem() (in module fre.app.remap_pp_components.tests.test_remap_pp_components) test_remap_static_variable_filtering() (in module fre.app.remap_pp_components.tests.test_remap_pp_components) test_remap_static_variable_filtering_fail() (in module fre.app.remap_pp_components.tests.test_remap_pp_components) test_remap_variable_filtering() (in module fre.app.remap_pp_components.tests.test_remap_pp_components) test_remap_variable_filtering_fail() (in module fre.app.remap_pp_components.tests.test_remap_pp_components) test_run_analysis() (in module fre.analysis.tests.test_subtools) test_run_avgtype_pkg_calculations() (in module fre.app.generate_time_averages.tests.test_generate_time_averages) test_run_fremake_bad_target() (in module fre.make.tests.test_run_fremake) test_run_fremake_build_script_creation_container() (in module fre.make.tests.test_run_fremake) test_run_fremake_build_script_creation_container_2stage() (in module fre.make.tests.test_run_fremake) test_run_fremake_checkout_script_creation_container() (in module fre.make.tests.test_run_fremake) test_run_fremake_checkout_script_creation_container_2stage() (in module fre.make.tests.test_run_fremake) test_run_fremake_checkout_script_creation_multijob() (in module fre.make.tests.test_run_fremake) test_run_fremake_checkout_script_creation_multitarget() (in module fre.make.tests.test_run_fremake) test_run_fremake_checkout_script_creation_serial() (in module fre.make.tests.test_run_fremake) test_run_fremake_cleanup() (in module fre.make.tests.compilation.test_run_fremake_builds) test_run_fremake_compile_script_creation_multijob() (in module fre.make.tests.test_run_fremake) test_run_fremake_compile_script_creation_multitarget() (in module fre.make.tests.test_run_fremake) test_run_fremake_compile_script_creation_serial() (in module fre.make.tests.test_run_fremake) test_run_fremake_container() (in module fre.make.tests.test_run_fremake) test_run_fremake_container_2stage() (in module fre.make.tests.test_run_fremake) test_run_fremake_container_build() (in module fre.make.tests.compilation.test_run_fremake_builds) test_run_fremake_container_build_fail() (in module fre.make.tests.compilation.test_run_fremake_builds) test_run_fremake_container_build_notransfer() (in module fre.make.tests.compilation.test_run_fremake_builds) test_run_fremake_container_build_specified_out() (in module fre.make.tests.compilation.test_run_fremake_builds) test_run_fremake_dockerfile_creation_container() (in module fre.make.tests.test_run_fremake) test_run_fremake_dockerfile_creation_container_2stage() (in module fre.make.tests.test_run_fremake) test_run_fremake_makefile_creation_container() (in module fre.make.tests.test_run_fremake) test_run_fremake_makefile_creation_container_2stage() (in module fre.make.tests.test_run_fremake) test_run_fremake_makefile_creation_multijob() (in module fre.make.tests.test_run_fremake) test_run_fremake_makefile_creation_multitarget() (in module fre.make.tests.test_run_fremake) test_run_fremake_makefile_creation_serial() (in module fre.make.tests.test_run_fremake) test_run_fremake_multijob() (in module fre.make.tests.test_run_fremake) test_run_fremake_multijob_compile() (in module fre.make.tests.compilation.test_run_fremake_builds) test_run_fremake_multiple_targets() (in module fre.make.tests.test_run_fremake) test_run_fremake_run_script_creation_container() (in module fre.make.tests.test_run_fremake) test_run_fremake_run_script_creation_container_2stage() (in module fre.make.tests.test_run_fremake) test_run_fremake_serial() (in module fre.make.tests.test_run_fremake) test_run_fremake_serial_compile() (in module fre.make.tests.compilation.test_run_fremake_builds) test_run_unknown_analysis() (in module fre.analysis.tests.test_subtools) test_runscript_creation() (in module fre.make.tests.test_create_dockerfile) test_settingsyaml_exist() (in module fre.list_.tests.test_list_pp_components_script) test_setup_cmor_cmip_table_repo() (in module fre.cmor.tests.test_cmor_run_subtool) test_setup_fre_cmor_run_subtool() (in module fre.cmor.tests.test_cmor_run_subtool) test_setup_fre_cmor_run_subtool_case2() (in module fre.cmor.tests.test_cmor_run_subtool) test_setup_histval() (in module fre.pp.tests.test_histval_script) test_setup_nccheck() (in module fre.pp.tests.test_nccheck_script) test_setup_ppval() (in module fre.pp.tests.test_ppval_script) test_setup_test_files() (in module fre.tests.test_fre_cmor_cli) test_setups() (in module fre.app.generate_time_averages.tests.test_generate_time_averages) test_split_file_cleanup() (in module fre.pp.tests.test_split_netcdf) test_split_file_data() (in module fre.pp.tests.test_split_netcdf) test_split_file_metadata() (in module fre.pp.tests.test_split_netcdf) test_split_file_run() (in module fre.pp.tests.test_split_netcdf) test_split_file_setup() (in module fre.pp.tests.test_split_netcdf) test_split_netcdf_file_regex_pattern() (in module fre.pp.tests.test_split_netcdf_regex) test_start_stop_calendar_missing_from_yaml() (in module fre.cmor.tests.test_cmor_yamler_subtool) test_string() (in module fre.pp.tests.test_rose_quoting) test_table_dir_does_not_exist() (in module fre.cmor.tests.test_cmor_yamler_subtool) test_time_avg_file_dir_exists() (in module fre.app.generate_time_averages.tests.test_generate_time_averages) test_update_calendar_type_jsondecode_raise() (in module fre.cmor.tests.test_cmor_helpers_update_calendar) test_update_calendar_type_jsonDNE_raise() (in module fre.cmor.tests.test_cmor_helpers_update_calendar) test_update_calendar_type_keyerror_raise() (in module fre.cmor.tests.test_cmor_helpers_update_calendar) test_update_calendar_type_success() (in module fre.cmor.tests.test_cmor_helpers_update_calendar) test_update_calendar_type_unknown_err() (in module fre.cmor.tests.test_cmor_helpers_update_calendar) test_update_calendar_type_valerr_raise() (in module fre.cmor.tests.test_cmor_helpers_update_calendar) test_update_grid_and_label_none_grid() (in module fre.cmor.tests.test_cmor_helpers) test_update_grid_and_label_none_grid_label() (in module fre.cmor.tests.test_cmor_helpers) test_update_grid_and_label_none_nom_res() (in module fre.cmor.tests.test_cmor_helpers) test_update_grid_label_and_grid_success() (in module fre.cmor.tests.test_cmor_helpers_update_grid_label) test_validate() (in module fre.pp.tests.test_configure_script_yaml) test_validate_fail() (in module fre.pp.tests.test_configure_script_yaml) test_vars_fixture() (in module fre.make.tests.test_make_helpers) test_yaml_ex_exists() (in module fre.app.remap_pp_components.tests.test_remap_pp_components) test_yaml_load_raises_file_not_found() (in module fre.yamltools.tests.test_helpers) test_yaml_load_reads_yaml_file_correctly() (in module fre.yamltools.tests.test_helpers) test_yamlfile_does_not_exist() (in module fre.cmor.tests.test_cmor_yamler_subtool) test_yamlvalidate() (in module fre.list_.tests.test_list_experiments_script) (in module fre.list_.tests.test_list_platforms_script) (in module fre.list_.tests.test_list_pp_components_script) timeAverager (class in fre.app.generate_time_averages.timeAverager) tmp_case2input() (in module fre.app.mask_atmos_plevel.tests.test_mask_atmos_plevel) tmp_case2ref() (in module fre.app.mask_atmos_plevel.tests.test_mask_atmos_plevel) tmp_input() (in module fre.app.mask_atmos_plevel.tests.test_mask_atmos_plevel) tmp_ps() (in module fre.app.mask_atmos_plevel.tests.test_mask_atmos_plevel) tmp_ref() (in module fre.app.mask_atmos_plevel.tests.test_mask_atmos_plevel) trigger() (in module fre.pp.trigger_script) truncate_date() (in module fre.app.remap_pp_components.remap_pp_components)

U

uninstall_analysis_package() (in module fre.analysis.subtools) unwgt (fre.app.generate_time_averages.timeAverager.timeAverager attribute)

update_calendar_type() (in module fre.cmor.cmor_helpers) update_grid_and_label() (in module fre.cmor.cmor_helpers)

V

validate() (in module fre.pp.histval_script) (in module fre.pp.ppval_script) validate_subtool() (in module fre.pp.validate_script) validate_yaml() (in module fre.pp.configure_script_yaml) (in module fre.yamltools.helpers)

var (fre.app.generate_time_averages.timeAverager.timeAverager attribute) var_has_time_units() (fre.app.generate_time_averages.timeAverager.timeAverager method) var_list_file() (in module fre.cmor.tests.test_cmor_mixer_calendar_integration) verify_dirs() (in module fre.app.remap_pp_components.remap_pp_components)

W

write_dataset() (in module fre.app.mask_atmos_plevel.mask_atmos_plevel)

write_summary() (in module fre.app.regrid_xy.regrid_xy)

Y

yaml_info() (in module fre.pp.configure_script_yaml)

yaml_load() (in module fre.yamltools.helpers) yamler_env() (in module fre.cmor.tests.test_cmor_yamler_subtool)